Gene linked to high kidney disease rates in blacks: study

July 16, 2010 |11:27 | Genetics  By : Team X

Researchers said Thursday they have identified gene variants that help explain high rates of renal disease among African-Americans, who have a four times greater risk of kidney problems than whites.

According to the study published in the journal Science, variants in the APOL1 gene are the culprits, and likely evolved as a survival mechanism against lethal parasites in Africa.

Investigators at Beth Israel Deaconess Medical Center and the Universite Libre de Bruxelles found patients with focal segmental glomerulosclerosis (FSGS) and hypertension-attributed end-stage kidney disease (H-ESKD) had variants in the APOL1 gene that changed the APOL1 protein sequence.

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Synthetic Biology and Cancer: Exploring the Possibilities

July 14, 2010 |10:44 | Gossips  By : Team X

Ten years ago, researchers created the first devices (here and here) widely viewed as launching the field of synthetic biology. In the decade since, advances in genomics and the chemical synthesis of DNA, among other fields, have created new tools for investigating and understanding the behavior of biological systems. Some researchers now believe that the time is right to harness these tools in new efforts against cancer and other diseases.

To explore how these tools might be used, NCI and the National Institute of General Medical Sciences convened a workshop in April called “Synthetic Biology and Biomedicine: Progress, Outlook, and Challenges.” The meeting brought leaders in the field to Bethesda, MD, to discuss everything from state-of-the-art technologies and their potential applications in cancer research to ethical questions raised by new discoveries. (See the sidebar below.)

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Potential Flaws in Longevity Genetics Study

July 13, 2010 |11:34 | Gossips  By : Team X

Here at Singularity Hub, any study that shows the genetic origins of extreme longevity – especially one showing huge effects and published  in a journal as prestigious as Science – is basically our bread and butter. The centenarian study we covered last week made lots of headlines.

And for good reason: it claimed that by looking at a random genome in the study, they could predict with 77% accuracy whether or not that subject lived past 100. But these amazing results have raised a few eyebrows among experts, and some significant problems have already been identified with its methods. Here’s a quick rundown of alleged flaws, as well as the authors’ rebuttals.

First off, for many in the genetics community, the effects of single variants on longevity seemed too strong. Jeffrey Barrett of the Wellcome Trust Sanger Institute has pointed out in the Guardian that in most genetics studies, a single genetic variant will only sway the chances of showing a phenotype by 1.5 fold, at best. The longevity study found a number of variants with far stronger effects, increasing an individual’s chance of hitting the century mark by as much as 10 fold. Barrett suggested that independent replication of the study would likely find far weaker effects.

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Study on genetics of longevity comes under scrutiny

July 10, 2010 |11:35 | Gossips  By : Team X

A study  published in the prestigious journal Science earlier this month suggesting that genes may hold a key for living to be 100 or older has since come under criticism from experts in the field of genetics. The study, led by Paola Sebastiani and Dr. Thomas Perls at the Boston University School of Public Health and School of Medicine, respectively, used genetic analysis to identify 150 gene variants that researchers used to predict whether people would live to be centenarians with 77% accuracy.

The findings were widely reported — by TIME, the New York Times, the Los Angeles Times, and elsewhere — as yielding clues to the secrets of long life, and potentially paving the way for genetic tests for longevity. Yet, skepticism from colleagues in the field of genetics has since given way to more vocal criticism of the study, the editorial process that led to its publication, and the media environment that put it in the headlines.

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Map of herpes virus protein suggests a new drug therapy

July 8, 2010 |10:43 | Genetics  By : Team X

Map of herpes virus protein suggests a new drug therapyMost viruses need cell-entry proteins called fusogens in order to invade cells. We have known that the herpes virus fusogen does not act alone and that a complex of two other viral cell-entry proteins is always required.

We expected that this complex was also a fusogen, but after determining the structure of this key protein complex, we found that it does not resemble other known fusogens," said senior author Ekaterina Heldwein, PhD, assistant professor in the molecular biology and microbiology department at Tufts University School of Medicine.

"This unexpected result leads us to believe that this protein complex is not a fusogen itself but that it regulates the fusogen. We also found that certain antibodies interfere with the ability of this protein complex to bind to the fusogen, evidence that antiviral drugs that target this interaction could prevent viral infection," Heldwein continued. Heldwein is also a member of the biochemistry and molecular microbiology program faculties at the Sackler School of Graduate Biomedical Sciences at Tufts.

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Genetic test to place family origins 'within miles'

July 7, 2010 |11:10 | Genetics  By : Team X

Analysis of a subject's DNA can place people with rural origins to within five miles of their family's home, a team from the University of Edinburgh claimed. The findings raise the possibility that people who live in cities but have roots in rural communities elsewhere in the same country could locate exactly where their ancestors came from. Previous studies have uncovered genetic differences between populations in different countries, making it possible, for example, to predict whether someone is of northern or southern Italian descent.

Genetic test to place family origins within miles

The Edinburgh researchers, working with scientists in Italy and Croatia, tested whether the same analysis could be used to distinguish between people from the same country who were separated only by short distances. The team, led by Jim Wilson, studied the genes of people whose four grandparents came from the same village in Scotland, Croatia or Italy. None of the volunteers were related to each other.

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Longevity Genes Unable To Explain Why Centenarians Live So Long

July 6, 2010 |10:37 | Genetics  By : Team X

Longevity Genes Unable To Explain Why Centenarians Live So Long.A study of over 1000 centenarians published in the prestigious science journal Science has identified 150 gene variants associated with extreme longevity, which has been defined as a lifespan of over a 100 years.

Researchers found, while most super-centenarians carried all the longevity markers, centenarians had various genetic variants combinations categorized in 19 genetic profiles.

While, centenarians were not found to be free of genetic variants associated with diseases, the fact remains that they remain unaffected by diseases partly due to the longevity SNPs that negate the negative effect of disease gene variants.

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Digital embryo gains wings

July 5, 2010 |11:14 | Gossips  By : Team X

The scientists at the European Molecular Biology Laboratory (EMBL) in Heidelberg, Germany, who 'fathered' the Digital Embryo have now given it wings, creating the Fly Digital Embryo. In work published today in Nature Methods, they were able to capture fruit fly development on film, and were the first to clearly record how a zebrafish's eyes and midbrain are formed.

The improved technique will also help to shed light on processes and organisms, which have so far been under-studied because they could not be followed under a microscope. "Non-transparent samples like the fruit fly embryo scatter light, so the microscope picks up a mixture of in-focus and out-of-focus signal– good and bad information, if you like," says Ernst Stelzer, whose group carried out the project at EMBL.

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New Patent Propels UTSA Biology Researchers toward Development of Tularemia Vaccine

July 3, 2010 |11:38 | Biology  By : Team X

New Patent Propels UTSA Biology Researchers toward Development of Tularemia VaccineThe University of Texas at San Antonio (UTSA) South Texas Center Emerging Infectious Diseases (STCEID), and Bernard Arulanandam, associate dean of research for scientific innovation in.

The UTSA College of Sciences, have been granted a U.S. patent for developing a process to create a vaccine for the deadly tularemia infection.

Tularemia, caused by the highly infectious bacterium Francisella tularensis, can cause serious disease in humans.

F. tularensis is carried primarily by animals such as rabbits and rarely causes human infections, but when breathed.

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Genetic Discovery Could Pave Way for Baldness Cure

July 2, 2010 |10:51 | Genetics  By : Team X

Researchers have linked alopecia areata, an autoimmune disease that causes hair thinning and hair loss in over five million Americans, to eight genes, which will likely open the flood gates for new treatments, Health Day reported.

The researchers were surprised to find that other autoimmune diseases like rheumatoid arthritis and type 1 diabetes have already been linked to these same eight genes, so drugs already in development could be used for hair loss.This greatly accelerated our ability to think about new drugs for patients with alopecia areata because.

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